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A preview of how large-scale single cell genomics complements … studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting … within populations that is a precursor to strain-level diversification and microbial speciation. … The work …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … University in British Columbia, Canada. This is the last of the podcasts we recorded in my hotel room at SIMB, or the … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …

Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look … growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … genomes within themselves and to other plant genomes. “Globally, cotton is the premier natural fiber crop of the …

For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … to the ascomycetes, one of the two main branches of fungi); another is a photosynthetic microbe, tucked in the … molecular mechanisms can help researchers better model global carbon and nitrogen cycling. Summary To shed light on …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … complete draft genome sequence. At the time, the vital global source of both protein and oil was also the largest … to sequence — roughly 1.25 billion Gb (gigabasepairs — most fungi are around 50 million Mb, or megabases, in size). So, …

Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … understanding of carbon and other nutrient cycles on a global scale. Summary Ace Lake, located in the Vestfold …

… mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional efforts in … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … missions in sustainable biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry.  …

… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … large-scale data, and professional expertise to support the global research community in studies of complex biological …

The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of …

… fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 researchers working in 21 … genomes of Dothideomycetes, the largest class of fungi, by lifestyles. Additionally, as part of an …

… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. … Biotechnol . Epub. Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. …