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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive … (symbionts) are transmitted between host generations, researchers investigated the role that bacteria living … a likely key to this evolutionary transition. Using this model, researchers also generated the first transcriptomic …
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A Complex Confection Decoded: Sugarcane Reference Genome
… major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main … deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  … DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called … heavily invested in being the bridge to help scientists and researchers achieve their analysis goals. Offering this tool …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … around this structure to facilitate sharing.  Recently, researchers have been able to study both sides of this …   These experiments focused on two species at once: the model legume species  Medicago truncatula and the …
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Statement on the Use of Genomics Data
… Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data … Inspired by the Human Genome Project (HGP), and building upon the principles for open access in the field of genomics … at the DOE Office of Biological and Environmental Research program. Following these discussions, the JGI will …
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Annual Genomics of Energy & Environment Meeting
… us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of … challenges.  The invited talks emphasize how the research infrastructure – DNA sequencing, synthesis, …
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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … a Professor of Genetics, Genomics and Development after his research interests shifted from condensed matter physics to … Cornell University, NY Postdoctoral scientist, IBM Watson Research Center, Yorktown Heights, NY …
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGAT)
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Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10T)
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… the genomes of two varieties of a close relative and model species. The following year saw the beginnings of … using switchgrass samples from these gardens, a team led by researchers at the University of Texas at Austin produced a … and environments. The long-term investments in both the genomics and gardens are helping these shrubby grasses …
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