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Draft genome sequence of Chryseobacterium limigenitum SUR2T (LMG 28734T) isolated from dehydrated sludge
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Natural Prodcast Episode 21: Elizabeth Parkinson
… exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … 10 to the negative 9th. Picomolar, 10 to the negative 12th. DAN: Yeah. So very-- BETSY PARKINSON: Very, very-- … that. JACKIE: So I guess when you get a new organism or a genome, let's say, and you're looking at clusters, is there …
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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Marianne Buscaglia
… affiliate researcher who uses metagenomics to study giant viruses in cold marine environments and is interested in …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This means it contains more than two copies of the genome , which can have pronounced ecological and … These are primarily tetraploids (4X or four copies of the genome) and octoploids (8X or eight copies of the genome). …
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JGI Scientists Pen Genome Watch Articles
Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in environmental genomics by writing for the column Genome Watch in  Nature Reviews Microbiology .  The latest …
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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Clarence Le
… researcher who identifies and analyzes novel clades of RNA viruses and determines novel viral gene functions that may …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore …
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Better Genome Editing for Bioenergy
… included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … a team of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s … CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, but these …
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