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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … podcast. BETSY PARKINSON: Awesome. Thank you so much for having me. Really excited to be here. DAN: Happy to have … think this is an area that is a little bit unclear whether for Streptomyces and actinomycetes, whether they can cross …
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Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533T, a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights … possible to seek out and characterize uncultivated viruses. For instance, a 2018 study from a JGI-led team uncovered … researchers previously applied this approach to uncover a novel group of giant viruses dubbed “Klosneuviruses.” …
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How Filamentous Fungi Sense Food
Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … breaks down plant cell wall materials including lignin, cellulose and hemicellulose. The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of …
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Nigel Mouncey
… genetics that started with his education and carried forward into his roles as a senior research scientist at … on the discovery, development and commercialization of novel production organisms and fermentation processes for vitamins, insecticides, fungicides, platform chemicals, …
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NeLLi — Symposium on New Lineages of Life
… that facilitate the shift from uncovering microbial novelties to deciphering metabolic and functional … novel microbial lineages, leading to a new appreciation for the extent of diversity. The phylogenetic and functional … of these new lineages will provide new cornerstones for research in the areas of bioenergy and biomedicine, as …
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Pinning Down a Piece of Photosynthesis
… and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … of metallic protein that no one’s ever had a structure of before,” said Crysten Blaby-Haas, a research scientist at the … University in St. Louis and the University of California at Berkeley, as well as other DOE user facilities — …
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IMG/VR
… metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and search through …
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Natural Prodcast Episode 5: Brad Moore
… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … Oceanography. And Brad and I, Alison, have known each other for quite a while because Brad was my postdoctoral advisor.  … Brad: Oh my goodness. Those were good years, Dan!  Dan: For too many years. Brad: And now look, you’re like, famous. …
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Forming Scientific Connections and Building Community
… experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … “ Development of a multiplex genomic integration system for the selection of genes essential for specialized carbon utilization ” Jesica Calderon : …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r ecombinase- a … “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using … used CRAGE to engineer domesticated bacterial strains with novel biosynthetic gene clusters (BGCs). BGCs make diverse …
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Simon Roux
Program. His responsibilities include the development of novel computational tools to identify virus sequences, the … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. …
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