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High-quality permanent draft genome sequence of the extremely osmotolerant diphenol degrading bacterium Halotalea alkalilenta AW-7T, and emended description of the genus Halotalea
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Frederik Schulz
… of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and … genomics and phylogenomics) and machine learning to find novel functions that may impact microbiome structure and … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel …
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Building Sphagnum Genomic Resources
… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … permafrost from the warming regional temperatures. For this reason, the U.S. Department of Energy is overseeing … recovering draft metagenome-assembled genomes for seven novel species of Acidobacteria through an approved CSP …
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The fungus that made itself at home
… new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have gained … rot Serpula lacrymans towards breaking down plant mass for conversion to sustainable, alternative biofuels and … Summary Unlike white rots, brown rots break down only the cellulose and hemicellulose, leaving the lignin behind. The …
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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Len Pennacchio
… his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and subsequently generated one of the … Hollaender Distinguished Fellow where he identified a novel apolipoprotein (ApoA5) involved in human and mouse …
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Natural Prodcast Episode 12: Nadine Ziemert
… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … what their role in nature, how have they been selected for or how do they evolve, all those things. So that’s what … it.  DAN UDWARY: Yeah, I feel a kinship with that answer for sure. That is one of the draws for me of secondary …
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Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation
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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … podcast. BETSY PARKINSON: Awesome. Thank you so much for having me. Really excited to be here. DAN: Happy to have … think this is an area that is a little bit unclear whether for Streptomyces and actinomycetes, whether they can cross …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … each individual microbial species within a community. Therefore, the process hinges on referencing to existing genome …
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