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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an email. “Therefore, …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… the project. Also my area of expertise over the past couple years is a little bit different from what I did during the …
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Learning to Look
… databases. In this case, the machine “learned” to identify a certain type of bacterial viruses or phages called … the algorithm, the search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 inovirus-like sequences compared to …
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Integrating Experimentation with Data
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Building Sphagnum Genomic Resources
Department of Energy under Contract Number DE-AC05-00OR22725. Funding for the peatlands work was also supported by the Austrian Science Fund (FWF, P23117-B17, P25111-B22, P26392-B20, and I1628-B22), the JGI (CSP …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… papers, including two Nature Plants publications, in five years, have come out of the JGI-supported project. “The JGI … the enzyme-encoding constructs, the team studied more than 70 enzymes and how they grab hold of different substrates. … of the DNA Synthesis Science Program by applying to the year-round Community Science Program Functional Genomics …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… a genome duplication event that occured some 60 million years ago. Massive gene loss, rampant gene duplications, and … for 85.2% of the C-fern assembly. While they did identify a couple WGD events, these events could not fully account … by US National Science Foundation (NSF; grant PRFB IOS-1907220 to D.B.M.; grant MCB-1856143 to R.J.S.; grant …
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Pinning Down a Piece of Photosynthesis
… light, transport molecules and regulate reactions. Identifying these proteins and then figuring out what they are … of genes, termed  The GreenCut2 Resource . It details 597 genes coding for proteins that are unique to … set out to tackle some of these genes, expressing and purifying the range of proteins these genes produced, to …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… of the physical memorabilia that she’s held onto over the years. The DOE brought together the people and resources … national labs to form the DOE Joint Genome Institute in 1997. Over the next seven years, and in collaboration with researchers at the Stanford …
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UC Merced Interns Reflect on Their JGI Summer Projects
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Supercharging SIP in the Fungal Hyphosphere
… under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by …
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