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Learning to Look
… more than 10,000 inovirus-like sequences compared to the 56 previously known inovirus genomes. “These genomes are so … approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… the project. Also my area of expertise over the past couple years is a little bit different from what I did during the …
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Building Sphagnum Genomic Resources
… matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment … the U.S. Department of Energy under Contract Number DE-AC05-00OR22725. Funding for the peatlands work was also …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… papers, including two Nature Plants publications, in five years, have come out of the JGI-supported project. “The JGI … of the DNA Synthesis Science Program by applying to the year-round Community Science Program Functional Genomics …
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Pinning Down a Piece of Photosynthesis
… list of genes, termed  The GreenCut2 Resource . It details 597 genes coding for proteins that are unique to …
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Supercharging SIP in the Fungal Hyphosphere
… under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of … Department of Energy operated under Contract No. DE-AC02-05CH11231. …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … of the physical memorabilia that she’s held onto over the years. The DOE brought together the people and resources … the DOE Joint Genome Institute in 1997. Over the next seven years, and in collaboration with researchers at the Stanford …
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UC Merced Interns Reflect on Their JGI Summer Projects
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
M. polymorpha is also among one of the plants representing 35 major evolutionary plant lineages in the  Open Green … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… version of the genome is assembled into sequences of 5.5 million basepair (bp) in length, while the previous … set up these gardens, we have them to study for a number of years. And that’s a real benefit for the research program.” …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… this way was challenging, according to Martin. “Twelve years ago, when we mapped the first sequenced RNA from the … Fungal Genomes project changed that. This is a multi-year project in collaboration with the JGI to sequence 1000 … After starting with about 200 fungal genomes, in just a few years, he said, the 1000 Fungal Genomes project, together …
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What Happens Underground Influences Global Nutrient Cycles
Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. Submitted …
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