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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of … technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s … to Ray and most of the rest of the 200-plus Zoom participants. While the virtual mic shifted to Ray for his …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in … those virus-host interactions? Do generalist viruses run rampant, capable of infecting different host species? Or, do … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and … institutions shared their works-in-progress with 86 participants in an online workshop to harness deep learning for … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a … infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community …
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … effort to develop guidelines and best practices for defining virus data quality. Reported in Nature …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable … collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions▿ †
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