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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … to integrate large genetic payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers … researchers are no longer limited to using model host microbes; theoretically, any microbe can serve as the …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … assignable assets program. Q: For a NEON Assignable Assets project, does the data produced become public as well? A:  … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … unique array of chemicals not typically found in oceans or soils.  A recent study published in  The ISME Journal     … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …
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Analysis of Ten Brucella Genomes Reveals Evidence for Horizontal Gene Transfer Despite a Preferred Intracellular Lifestyle▿ §
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … art of hands-on microbiology and experimental validation.  Microbes run the world, playing key roles in regulating … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent … virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … the previous year and continue working on their research project! The JGI-UC Merced internship program was founded in …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to … Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … genome for the sugarcane cultivar R570 has been  published in  Nature by an international consortium. With the genetic … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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JGI announces 2024 Functional Genomics awardees
… genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …
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