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… in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos went on to … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …

Metagenomic datasets could help map out microbial diversity hotspots … biodiversity. Using publicly available genome sequence data generated over the past three decades, their study … the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes …

… and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …

… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …

… and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …

… used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new … reflecting factors such as the quality and number of datasets for human microbiome data. In other environments, …

… . … Morel Mushrooms on MycoCosm Data Portal …

P. hallii Mutant Library … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional … Transcriptomes of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage …

… with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data with …

… office building, its roots are akin to the ground floor lobby. People walking into the lobby have many reasons for … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal genomes on the JGI data portal MycoCosm . They looked for genes known to be …

… so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify … and to do research to get a better understanding of that data. ALISON: Awesome. So tell me why should I even care … I kind of see it. DAN: So what we’ve got here is, I just grabbed a photo of a “biochemical pathways” chart. So if you …