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SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … to more sustainable energy production.  However, less than 10% of the microbes found in any environment can be grown in … that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and … to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 … deep dives into genomics, computational tools, and big data.  …
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Approved Proposals
… downloadable pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the …
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JGI at the AGU Fall Meeting
… with the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting here. Here … Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm … Hall D-F poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types …
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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
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Picking Up Threads of Cotton Genomics
… for Biotechnology. “The goal has been for all this new cotton work, and even the original cotton project was to … D are available for comparative analysis on JGI’s plant data portal  Phytozome , which is a community repository and … with the JGI Plant Annotation pipeline, which provides high quality comparisons of these genomes within themselves and …
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