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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp. tularensis A1 and Schu S4
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Doubling Down on Known Protein Families
… the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … with at least 100 members.  “If you have 100 sequences, the quality of the cluster is significantly higher because it is …
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Len Pennacchio
… the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, … Deputy include interacting with users seeking to exploit new genomic technologies and providing a vision for future technical JGI directions for DOE User science. …
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New Research Sheds Light on Diversity in the Deep Sea
… microbial communities could lead to the development of new biotechnologies around clean energy,  biofuels and … and metabolic potential of the communities studied. The datasets are available on the JGI’s  Integrated Microbial …
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Chapter Twelve Genomics for Key Players in the N Cycle From Guinea Pigs to the Next Frontier
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CheckV assesses the quality and completeness of metagenome-assembled viral genomes
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … understanding of multiple forest systems, this work sets up protocols and pipelines that other teams can use … for the same route. “It was really amazing how the quality of the data improved thanks to that massive amount …
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Improving the Cacao Genome and Phytozome
… by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the … Wrigley. The annotated genome has been updated to a high quality modern standard and includes RNA-seq data. The … version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the goals in updating the genome …
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DAP-seq Drives Robust Mapping of Gene Regulation
… samples in a single experiment — and integrated these data with single-cell gene expression maps. Together, the … criteria provides a robust community dataset of improved quality; deep insights identify the most important binding … such as  Arabidopsis and sorghum. Together, these datasets allow scientists to explore how gene regulation varies …
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Alabama Agricultural & Mechanical University Internship Program
… Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. …
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Complete genome sequence of Sulfurimonas autotrophica type strain (OK10T)
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