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Synthetic Biology Informatics Group
… develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems … messenger RNA sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… was green millet (Setaria viridis), a small model grass with a short lifecycle that uses a carbon fixation process … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … different applications. The JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been …
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Uncovering Novel Genomes from Earth’s Microbiomes
… 52,515 microbial draft genomes generated from environmental samples around the world, expanding the known diversity of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the microbial communities in the environmental samples without needing to isolate individual organisms, using …
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New Research Sheds Light on Diversity in the Deep Sea
… seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, … and the University of Wisconsin-Madison collected 40 samples from five oceanic regions to better understand how … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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Taking Stock of the Known and Unknown Microbial Space
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out … recover MAGs by extracting data directly from environmental samples over the years have significantly expanded the known …
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The Power of One, Amplified
… cells from a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Science Programs
The JGI’s Science Programs offer support to users and their … of user projects, develop cutting edge approaches for and with users, and create computational tools and resources for … users are encouraged to reach out to program heads with questions on opportunities to partner with the JGI on …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … work. Former JGI postdoctoral scholar Margot Bezrutczyk collaborated extensively with Cole and Serrano to collect …
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Eelgrass Proves to Be Much Younger Than We Thought
… that figure is likely closer to a mere 250,000 years — with many key colonization events in the Atlantic ocean occurring within the last 40,000 years. The Impact Eelgrass represents … events.  Looking ahead, scientists can use this information to assess what specific traits make older …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a … solutions, the JGI is well-positioned to provide users with capabilities to create genomics-enabled insights into a …
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Logos and Templates
The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI logo – stacked JGI logo – horizontal JGI logo – indicia …
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