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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The … Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior scientist, …
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Ian Blaby
… biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool … … Editorial Board member of Biology and Synthetic Biology JGI Co-chair, People Stewardship committee (2020-2022) UCLA …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … 2016 Vogel, J.P. Ed., Springer, Switzerland. ISBN: 978-3-319-26942-9 Gordon, et. al. 2014 Genome Diversity in … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Honey Bee Gut Microbiota Divvy Up Dinner
… these bacterial groups. But why the strain variability? The authors think the reason may be that … enzymes themselves. One other finding that interested the authors was that an evolutionary analysis of  … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Natural Prodcast Episode 19: Bill Fenical
… things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … So fortunately, the secondary metabolite component of the JGI, people are interested in this area. DAN UDWARY: I know … gets off the sequencers. The pandemic has obviously slowed JGI down a little bit. But I know these things are underway. …
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Len Pennacchio
… … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data … technologies and providing a vision for future technical JGI directions for DOE User science. … Complete Publications …
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Picking Up Threads of Cotton Genomics
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … assembled the genomes of these five cotton lineages. Senior authors of the  paper published April 20, 2020 in  Nature … cattle feed crop,” noted David Stelly, another study co-author at Texas A&M University. “This report establishes new …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities … Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: …
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