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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the … Summary As the planet has changed, so have plants. Curious about their ability to adapt to changing environments, … and in flowering plant lineages.   With the information about  Marchantia -specific innovations and adaptations, …
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Triggering Morel Fruiting
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are … from co-habitant microorganisms were unmasked. Plant polysaccharides such as starch and cellulose were rapidly … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Adopt-A-Genome
… (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State Fresno) and two …
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Fishing for Novel Cellulose Degraders
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and unknown. The challenge remains to learn more about what microbes are present in any given … the function-driven, single-cell screen can uncover more about cellulose-degrading microbes. The new technique is …
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Silver age of GOLD introduces new features
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … repositories, as well as project data entered by external users. The Impact One of the significant challenges in … information is available — enabling metadata-driven scientific discoveries. GOLD’s  public Application …
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Global ecotypes in the ubiquitous marine clade SAR86
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2022 Progress Report
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … Lab), is to become the leading integrative genome science user facility enabling researchers to solve the world’s …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors … Kaushal‘s mentor, described his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic … tasks we assigned.”       Click here to watch a video about the Biotech Partner summer interns at the JGI. What …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… and what escapes to the atmosphere in the form of greenhouse gases (e.g., carbon dioxide, methane, and nitrous oxide). Summary To do this work, the international scientific team led by Petr Baldrian of the Czech Academy of … than expected. The transcriptome data had suggested about a 50/50 split between fungal and bacterial enzymes. …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how they deter … the New Investigator proposal, and receiving feedback from reviewers, was invaluable in preparing the large-scale …
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate … bacterial diversity. The team conservatively estimated that about 42% of the bacterial diversity has no genomic …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort … Barana Mentor: Zhong Wang Project:  Embeddings Based Clustering of Biosynthetic Gene Cluster for Novel Natural … video below to see what some of the interns had to say about their time at the lab. …
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