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Natural Prodcast Episode 16: Marcy Balunas
… Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …
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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions — with capabilities that had remained largely unknown and underutilized by industry. When … User Programs entail a competitive, proposal-based process including peer review. The process is streamlined, with …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science … and DBI-2047598 to K.A. We thank the Department of Energy Joint Genome Institute (Community Science Program award 339, lead Peter …
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Micro-Scale Applications Group
… group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … link functional information with individual cells. Research Team    … uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … carbon cycling, biodegradation and biogeochemistry. This research helps translate their genomic potential into …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … stories about natural products, so you can get a feel for why I think they’re so important, and we’ll start to explain … of that, that most people, I think, believe now is that the communities where this happened have a tendency to be …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … opportunities, and the  Office of Science Early Career Research Program .   If “BERSS” is not mentioned in the BER … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA …
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Diversity and Distribution of Hydrocarbon-Degrading Genes in the Cold Seeps from the Mediterranean and Caspian Seas
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Natural Prodcast Episode 17: Cassandra Quave
… culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … spike protein and the ACE2 receptor, so we’re looking at viral entry inhibitors. But the other important part of our …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … following ways: Data integration is critical to exploring research questions in a comprehensive, multi-disciplinary way. … users together through our systems, we build far-reaching communities of researchers to bring down barriers to …
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