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… out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered… … it so easily with fungi. So… NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk … this and that. They’re doing all this 16S and I said, “Why don’t you just include the ITS too? It’s so easy to add …
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Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … bit about your perspective on that kind of technique and why it’s valuable to you? Kate Duncan: I think both genome …
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… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … not know what to do. We did not know how to culture marine isolates from the ocean. We didn’t know whether to study … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … have against pathogens from the clinic. At that point, isolates get shipped to us in Wisconsin, and we try and use …
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We focus our efforts on integrating database mining and sequence design with scaling the production of large, … developing methods for converting digital information from sequence databases into biotechnological or environmental …
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… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, …
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… then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right, Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against … get made fun of by my now-wife, because she was wondering why it is that we needed to produce more toxins in the lab …
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… through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …
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… tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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… able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know … ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less … biology perspective, like if you have a cluster of genes, why can’t you just engineer you know, a promoter or an …
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… and Environmental Research (BER) program, set the final sequence allocation for this program. …
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