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… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … BARONA-GOMEZ: Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during simulated range shifts of … bioenergy crops … Characterization of simplified soil communities with high and low carbon use efficiency across …

… … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …

… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … are many others, including Streptomycetes, which are common soil bacteria. DAN UDWARY: Yeah, we talk about them a lot … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, … off through these areas. And you can do– with a teaspoon of soil from outside, you maybe have to do a 10,000-fold …

… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. … could imagine if you have two colonies of bacteria in the soil or something and they’re competing with each other, if …

… enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … DAN UDWARY: That’s weird. I hadn’t heard that before. Why is that? Why would that be the case? ALISON NARAYAN: …

… a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about sponges, go pull … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less …

A metagenomic look at the soil microbes present a year after a wildfire. The Science … which microbes in the soil persist after a wildfire — and why they thrive — gives forest managers more avenues to … builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful snapshot of what soils …

… group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated … now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with …

… been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion and … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   … it so easily with fungi. So…   NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk …