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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …
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Natural Prodcast Episode 20: Brian Bachmann
And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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Viral Genomics Group
… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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Publication Policy
… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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