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Offerings & Capabilities
… through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …
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Filling in the Plant Tree of Life
… most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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Natural Prodcast Episode 18: A CSP Primer
… at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these … section. We want to be sure that the PIs can articulate why their work falls within one of these DOE mission areas. …
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Natural Prodcast Episode 23: Aaron Puri
… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. … JGI and this was before they were integrated. So I thought, why not feed it in there. And I went to group meeting and …
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Plant Program
… biofuels by studying perennial grasses and fast-growing trees as renewable energy feedstocks. It also tackles … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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Publication Policy
… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types …
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Microbiome Data Science Team
… of bacterial and archaeal isolates expand coverage of the tree of life.  Nature Biotechnology  35(7):676-683 Schulz … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …
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Sequencing the fungal tree of life
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Metagenome Program
… comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …
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High‐resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly
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The genome of Eucalyptus grandis
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Synthetic Biology Lab
We focus our efforts on integrating database mining and sequence design with scaling the production of large, … developing methods for converting digital information from sequence databases into biotechnological or environmental …
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