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Natural Prodcast Episode 24: Jackie Winter and SMC
… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … and personnel resources for genomic research and sequence-based science.  Projects include de novo generation …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… … DAN: All right. Welcome back to Natural Prodcast. I did it. … The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a … We focus our efforts on integrating database mining and sequence design with scaling the production of large, … developing methods for converting digital information from sequence databases into biotechnological or environmental …
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Natural Prodcast Episode 18: A CSP Primer
… … DAN UDWARY: It’s been a while, but Natural Prodcast is back … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, …
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Scientific Advisory Committee
The Scientific Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific … and Environmental Research (BER) program, set the final sequence allocation for this program. …
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