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… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … The Microbial Program focuses on using advanced sequencing technologies to … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

… Researchers start pinning down how a fungal symbiont spurs … poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …

… DAN UDWARY: It’s been a while, but Natural Prodcast is back … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …

… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … The JGI is inviting researchers using the U.S. Culture Collection Network (USCCN) to …

… Data produced and released by the US Department of Energy (DOE) Joint Genome … Embargo : A period in which data is not publicly available in JGI systems or outside … For sequencing or metabolomics projects: data are subject to a  one-year embargo .  For each data or …

… DAN: You’re listening to the US Department of Energy Joint … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against …

… As a National User Facility, the JGI serves more than 2,500 users that … Our User Programs entail a competitive, proposal-based process including peer review. … SPPs enable research funded by an industry partner to perform a defined … CRADAs enable research jointly sponsored by Berkeley Lab and …

…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … This work was supported by an intramural seed grant (IGSP 2008001) to …

… A fungus relies on bacteria to regulate key components of its reproductive … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as … This research was supported by the National Science Foundation and the …

… Dan Udwary: You’re listening to the Department of Energy … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean …

… Retracing how the dry rot Serpula lacrymans adapted to a new … from similar organisms, researchers have gained insights on why the dry rot ( Serpula lacrymans ) is so destructive in … Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …