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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … to come up with an extraction procedure for the soil and acquire the permits to do so. They used images from Google maps …
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Project Management Office
… PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … Please review our FAQ in advance of contacting the PMO office.  … submission of sequencing data for synthesis – the DOE requires that all work performed in its User Facilities be …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … at how they were made was really interesting and intriguing to me. And I could combine my passions in different … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated … partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial …
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Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … the recording. But I recently changed the audio editing suite I use which had some nice magic that clean things up. …
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Natural Prodcast Episode 5: Brad Moore
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … And Brad and I, Alison, have known each other for quite a while because Brad was my postdoctoral advisor.  … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. The program lays the groundwork for …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for … products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the …
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Natural Prodcast Episode 8: Eric Schmidt
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … And it turns out that a lot of natural products are built up from amino acids, so they’re secondary metabolite … the end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  …
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