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The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum
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Detailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory level
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Characterization of a polyketide synthase in Aspergillus niger whose product is a precursor for both dihydroxynaphthalene (DHN) melanin and naphtho-γ-pyrone
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Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
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Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry
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Plant Program
… climate and soil conditions around the globe to identify genes to improve our domesticated species.  The program … Plant Comparative Genomics portal. Families of related genes representing the modern descendants of ancestral genes are constructed at key phylogenetic nodes. These …
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Fungal & Algal Program
… team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a collection of fungal genes conserved across the fungal tree of life or its major …
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Natural Prodcast Episode 19: Bill Fenical
… they could be a whole bunch of things. When we started testing our molecules, we found the targets to be diverse … then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s … we found out what it was pretty soon. We started testing it in collaboration with the National Cancer …
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Natural Prodcast Episode 16: Marcy Balunas
… Do you think that they always cluster or could the genes be separated on a genome?  Dan: Oh yeah. It’s biology … how that molecule is built and you should be able to find genes in the organism in its sequence that encode for that … discovery.  DAN: Tell me about that biological activity testing then because I know that I have been out of that …
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Natural Prodcast Episode 18: A CSP Primer
… RNA alongside. That really helps us to determine where genes start and end and really help improve our annotation. … just give them the data output, but we tell them which genes may be affected by that and how. So a lot of goes into … equivalent is for more complex organisms, or hundreds of kb synthesized, and so on The project must fit within the DOE’s …
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Products
… Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into … Constructs 5-10kb in size Single gene or multiple small genes assembled totaling 5-10kb in length, cloned into … DNA Synthesis Combinatorial libraries Multiple genes synthesized and cloned into a vector of choice in various …
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