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… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …

… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes … specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or pathogens) and as the most efficient degraders of plant biomass. These abilities are crucial for sustainable …

Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by …

All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … technology (IT) activities and strategic plan. … The Plant Program Advisory Committee is chartered to offer … management and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized …

Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … mentor students, teaching classes, and really setting the stage for what I really wanted to do and getting to– so I … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a …

… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Accordingly, the U.S. Government retains a … JGI is not responsible for the contents of any off-site pages referenced. … Disclaimer of Liability … Disclaimer of …

… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

As an Integrative Genome Science User Facility, the JGI plays a leadership … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …

The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from … and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of …