iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
Results
Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach
A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
Antarctic archaea–virus interactions: metaproteome-led analysis of invasion, evasion and adaptation
Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)
Diversity and function of methyl-coenzyme M reductase-encoding archaea in Yellowstone hot springs revealed by metagenomics and mesocosm experiments
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
Geochemistry and Mixing Drive the Spatial Distribution of Free-Living Archaea and Bacteria in Yellowstone Lake
Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota
Propagation of viral genomes by replicating ammonia-oxidising archaea during soil nitrification
Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
