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Natural Prodcast Episode 14: Nigel Mouncey
… that for this interview Alison was not available, but no worries, she’ll back next time! We’ve already got lots of … And these were not in natural products, these were in studying regulatory mechanisms of, first, E. coli and then … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But …
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Examples: Successful LOIs & Submissions
… Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users … from the public sector: academic and government institutions — with capabilities that had remained largely unknown … user companies. Now the Department of Energy is uniting National Labs and industry, including User Facilities like the …
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JGI Scientists Pen Genome Watch Articles
… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  Metagenome Program lead, shone a spotlight on  ammonia …
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Natural Prodcast Episode 6: Marc Chevrette
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … terrible. I was able to clean it up quite a bit, and the conversation was so interesting that I wanted to include it. … it’s gone. MARC: – an exciting thing was – What’s that? Sorry?  DAN: And now it’s gone. MARC: Yeah. Yeah… DAN: So …
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Natural Prodcast Episode 4: Nancy Keller
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … are afraid of fungi?    DAN: I think yes, I think that’s correct. I mean, you know, my experience with Aspergillus was … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you …
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Special Initiatives & Programs
… Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and DE-FOA-0003615 , which are both … 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar metabolomics samples, and should generally conform …
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … high chance of success. DAN UDWARY: How do I phrase this? Sorry. [LAUGHTER] I want to ask about to what extent there …
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Emiley Eloe-Fadrosh
… ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … Prospective users with questions on how to partner with the Metagenome Science Program on their research are encouraged …
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Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … system. So I was missing bones and I had to have a lot of corrective surgeries as a young child. And so many of those … And for the audience, ethnobotany is the scientific study of the ways that people interact with plants, whether …
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Who We Are
… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the … to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … to. DAN UDWARY: All right, well let’s talk about that. Oh, sorry go ahead Alison. ALISON TAKEMURA: Yeah, well I was … fitness. That is what a fitness landscape is. You have to correlate two or more factors that will actually have an …
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