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Metagenome Program
… interactions, over ecological and evolutionary time scales.The Metagenome Program combines large-scale, … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements … Integrating metatranscriptomes and metagenomes can, for instance, deepens our understanding of microbial …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… stuff, and I hope you enjoy it. And just to remind you, you can get transcripts, and show notes with links to papers … or online catalog, I guess. So we've also been able to get soils from Purdue campus itself and been able to actually … we have just recently finished the synthesis of the first set of these molecules and are exploring the promiscuity of …
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Project Management Office
FAQ in advance of contacting the PMO office.  … Before work can start on any approved proposal – including the … Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… hoping this episode and the transcripts will be one thing I can point people to when it comes to getting out information … to mentor students, teaching classes, and really setting the stage for what I really wanted to do and getting … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a …
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Frequently Asked Questions: Proposal Submission
Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at … calls are open to both domestic and international applicants from any institution type and at any career stage. … Benefits sharing in the US National Parks USDA Animal and Plant Health Inspection Service permits US Fish and Wildlife …
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Metabolomics
… samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified … … Read more about our submission guidelines, what you can expect from your results as well as our library …
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Natural Prodcast Episode 16: Marcy Balunas
… that know what they’re doing much better than I ever can at the level that we’re working. And so we do … to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … And so it was done, like as soon as I did that, I was set like “This! I want to do this!” And so and of course …
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Natural Prodcast Episode 15: Katherine Duncan
Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you are Kate Duncan? Or do … questions that we can only really address with bigger data sets and integrated data sets. So yeah, in terms of, I … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Plant-Microbial Interactions Group
… terrestrial world. Research Team    … Plant microbiomes hold the amazing ability to influence plant … that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the …
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Natural Prodcast Episode 18: A CSP Primer
… of questions from scientists about whether and how they can work with the JGI, and, you know, I’m always really … genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in terms of the annotate, … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …
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Natural Prodcast Episode 7: Ben Shen
I’m hoping to get a new one out every two weeks. This time, we’ve got a great interview with Ben Shen, from the … I’ll put up some structures and link to some resources you can use to get caught up, if you’re not already familiar … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … are biosynthesized and their roles in the environment, can unlock new avenues for bio-based products and bioenergy … the synthesis and function of these biologically significant compounds. By expanding the repertoire of secondary …
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