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Natural Prodcast Episode 8: Eric Schmidt
… have heard how a lot of us who work in fungal natural products, especially in the old days, saw how hard it was – … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … doing was pursuing with Jacques Ravel, at TIGR, metagenome sequencing, which was very early days for that technology. …
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Natural Prodcast Episode 13: Francisco Barona Goméz
Institute’s Natural Prodcast– a podcast about natural products and the science and scientists of secondary … or Paco, as he prefers to be known among friends in natural products. He’s from Langebio in Irapuato, Mexico, and an … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… in chemistry, and what sparked your interest in natural products? BETSY PARKINSON: Sure. Definitely. So, I got my … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you … at the college level. So-- DAN: Yeah, for sure. And JGI is sequencing quite a few of the things that end up-- BETSY …
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Natural Prodcast Episode 16: Marcy Balunas
… means a lot, especially when you’re working in natural products right. There’s many different avenues toward … really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more … in this project, the interaction with JGI was really around sequencing for, I think, for the fungus garden and some of …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … which is eligible for BERSS). Available Resources All JGI products are available through BERSS. Learn more about our  … a core facility instead. Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar …
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Natural Prodcast Episode 17: Cassandra Quave
For those of you want to understand more about natural products and drug discovery, or the challenges of academia, … things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … to understand more about plant natural products? We have sequencing facilities, DNA synthesis, metabolomics. Where do …
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Frequently Asked Questions: Project Management
… projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website for more … manager may then schedule and allocate resources for DNA sequencing. … No. However, the JGI does maintain a list of … … Guidance on international shipments can be found in the Sequencing Sample Overview file in our HERE (TK) .  Note: …
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Natural Prodcast Episode 20: Brian Bachmann
… which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … now her research in Utah touches on many areas of natural products biosynthesis and drug discovery. If you enjoy the … it was a big deal. And you really had– I mean, the whole sequencing endeavor, had a cost, how much blood, sweat, and …
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FICUS-NERSC/KBASE
… plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … in publication of results. … Submission … More on Sequencing Projects …
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Natural Prodcast Episode 22: Alison Narayan
Industrial Microbiology and Biotechnology (SIMB) Natural Products meeting earlier this year. And today we have our … [project] with JGI, how many flavin monooxygenases are you sequencing, sort of along that vein, of if you have one or … guess with along that line, with JGI, like how many are you sequencing currently? ALISON NARAYAN: Yeah. So– yeah, with …
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Natural Prodcast Episode 3: The Primer, Part 3
… the basic science and the history of the field of natural products or secondary metabolism, depending on which term … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … We have a lot more data. Obviously, there’s been a lot of sequencing going on, especially at the JGI and in other …
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Natural Prodcast Episode 4: Nancy Keller
… we had with scientists in the field of natural products. So, it’s a departure from the previous episodes … everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – to get … sequence is really cheap. I’ve got colleagues that are sequencing dozens and dozens of fungi, mostly coming out of …
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