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Metagenome Program
… and metabolic potential, with implications for energy production, environmental sustainability, and many other … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial …
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Single Cell Research Group
… focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … Professor, UC Santa Barbara Esther Singer: Director of Product and Market Development, Twist Bioscience Scott … Chris Rinke: Research Officer, Australian Centre for Ecogenomics Patrick Schwientek: Cofounder & CTO, Oralta …
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Plant Microbial Interactions Group
… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated … 10.1038/s41477-024-01666-3 10.1016/j.celrep.2023.112676 10.1016/j.devcel.2022.01.008 …
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Workforce Development & Education Outreach
… The CalTeach Summer Research Institute (SRI) at UC Berkeley is a program designed to …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week is Professor … figured that out already from the book, not so great at growing them, unfortunately. I also– ALISON TAKEMURA: I don’t … acronyms to NSF, National Science Foundation, NIH, National Institutes of Health, for those. I figure most of the …
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Fungal & Algal Program
… for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these … including sustainable biofuels, biomaterials, natural products, and environmental solutions, fostering a bioeconomy … traits that have direct applications in bioenergy production, carbon management, and environmental …
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Natural Prodcast Episode 11: Marnix Medema
… the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science … two years? So that’s the new model that we’re now following. And I think proposed it at a moment, and I think that … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …
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Microbial Program
… Diversification of the microbial product catalog : Beyond minimal draft and improved draft … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …
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Special Initiatives & Programs
… are both eligible for BERSS). Available Resources All JGI products are available through BERSS. Learn more about our  offerings, capabilities and products . A minimum request of 1 Tb of sequence data is … feedstock crops: Center for Advanced Bioenergy and Bioproducts Innovation , led by University of Illinois at …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should … simple way, the idea here is then that the bacteria are growing. They're, what, excreting at a base level these … based on what component they might be interested in like genomics, metabolomics, just basic chemistry, natural …
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Natural Prodcast Episode 6: Marc Chevrette
… .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of … by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … is trying to address is, is directly that in the face of growing antibiotic resistance, so we’re looking in soil that’s …
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New Lineages of Life Group
… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent …
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