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A renaissance for the pioneering 16S rRNA gene
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Plant Program
… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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User Support
… work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the … Project design with Principal Investigator Providing a general orientation to JGI systems to Investigators … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … and 200 polar/500 nonpolar metabolomics samples, and should generally conform to the guidelines for our  CSP Large Scale …
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Natural Prodcast Episode 13: Francisco Barona Goméz
Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … of primary metabolism as being the standard set of shared reactions that most living organisms share – have together. … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Natural Prodcast Episode 24: Jackie Winter and SMC
Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … bit more into fungi and learning the differences of all the genetic differences and then expanded on on that knowledge … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: …
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Natural Prodcast Episode 8: Eric Schmidt
… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … which is a short peptide and all of these enzymes that do reactions on that peptide. Often, the reactions that take … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Mission
… and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and … are at the core of many environmental processes, and the genetic makeup of microbial species and communities forms …
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Natural Prodcast Episode 5: Brad Moore
… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … to do dihalogenation. It’s one of those, you know, early-on reactions that we see. And so nature does that as well. But …
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