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Sequencing Technologies
… and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE … sequencing. They apply Lean Six Sigma practices to process optimization and development approaches, testing various … works best for applications. The team works hand in hand with the Project Management Office to help ensure the JGI’s …
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Natural Prodcast Episode 17: Cassandra Quave
… and Sciences. She’s an ethnobotanist and the herbarium curator there, with a broad range of experimental work on plants … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … comes to plant natural products is rife with really poorly designed studies. We have studies where people write about …
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Natural Prodcast Episode 23: Aaron Puri
… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … with their target. And so, for example, you could think of designing one of those that can trick an enzyme into … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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FICUS Overview
… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate … Previously, researchers had to apply to each facility with separate review schedules and selection processes, … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Plant Program
… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the most … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews … twofold but for different reasons to learn about how nature builds molecules because nature does this with such elegance … So– yeah, with our collaboration with JGI , we basically designed a library that includes hundreds of different …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Building Sphagnum Genomic Resources
… (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon … These resources would provide the research community with the ability to address questions such as sphagnum’s …
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User Support
Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers … with JGI scientific and technical experts Project design with Principal Investigator Providing a general … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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How To Use Our Systems
… … Information on Software Looking for information on our software, including BBTools ? Click to find that on our archive site.  …
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Forming Scientific Connections and Building Community
… on their summer projects. Watch the short video here to see what they had to say about their experiences and what they’ll take with them as they go forward in their careers.   Listed … Mentors Daniela Cassol, Jeff Froula & Ed Kirton Project: “ Streamlining computational studies of misfolding proteins …
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Special Initiatives & Programs
… are NOT eligible for BERSS support through the JGI (with the exception of DE-FOA-0003453, which is eligible for … . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the … Program is for faculty-level scientists who are seeking to build upon their line of scientific inquiry by leveraging …
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