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… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data … host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … identities (ANI) and fraction of orthologous genomic regions (Alignment fraction, AF) have been computed for …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help access complicated natural product gene clusters, and we’re all really excited about that, and …

… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more …

… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are Tet repressors that … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to sequence two …

The mission of the Joint Genome Institute is to serve the scientific … plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. …

… written by M. Wayne Davis or commercial options include SnapGene . … How To Use ApE To save your ApE file as a Genbank … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …