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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … before– or kind of around about when the first genome sequencing was done. But natural products– marine natural … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … scientific audience whereas now I’m sitting here with two people who know way more about natural products than I … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute provides advanced … of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … better to do it together, to join forces instead of to make two competing tools. If we had known about your tool, Dan, …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … to grow. If you hear Nigel talk, he is very interested in sequencing a lot more natural product-heavy culture …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to sequence two … Patrick would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … NIGEL MOUNCEY: Oh, sure. I think our legacy obviously is in sequencing.  DAN: Of course.  NIGEL MOUNCEY: Sequencing the … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … mining, and how we might start to better connect those two things, because I think that’s ultimately what needs to … us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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Natural Prodcast Episode 18: A CSP Primer
Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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