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Genome-wide analysis of lectin receptor-like kinases in Populus
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … technologies – it’s no longer a silo. It really requires interaction from many different disciplines. And so this is … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … in multiple directions. On the fungi side, underground mycorrhizal networks can serve as a reservoir for carbon …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … Kyrpides N. C., Woyke T . Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … Some plants and fungi have mutually beneficial (e.g., mycorrhizal) relationships, but not all plants and fungi can …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … called Salinospora . This new genus was discovered by friends and colleagues at the Scripps Institution of …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how … angry with one another, and trying to unpack all of those interactions. You know, that’s what gets me excited. That’s …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are … that the expression of these gene clusters play in these interactions. But also things like trying to predict at …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science … drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory …
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