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Mission
… information into actionable insights and solutions. Genome-enabled biology provides solutions to strengthen … health, pharmaceuticals, and cosmetics. Food crops, feed, animal agriculture or aquaculture, and related production … or pollution, including biogas, greenhouse gases, climate change, wastewater treatment, sewage, solid or liquid …
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Single Cell Research Group
… Phylogenetic diversity estimates show that the gap between cultivated and uncultivated … Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Offerings & Capabilities
… transcriptomic, proteomic, phenotypic, metabolomic, imaging, sensor, and other data produced at scales amenable …
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Sequencing Technologies & Products
… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
Learn more
Natural Prodcast Episode 13: Francisco Barona Goméz
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … So if you want to learn about the differences between primary metabolism and centralized metabolism, or what a … of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like …
Learn more
Institutional User Agreements
… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The recent … must be in place.  This is in addition to an active 2024 User Agreement or JGI BDLUA. MATERIAL TRANSFER …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …
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Project Management Office
… of Work, completing a formal User Agreement, and ultimately launching the user’s project. See below for details …
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Products
… Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Natural Prodcast Episode 20: Brian Bachmann
… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … also done things where we’ve grown organisms in ultra minimal media. So you could take International Streptomyces …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: … by industry. When Director Nigel Mouncey joined the JGI in 2017, he brought with him 20 years of industry experience — … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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