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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … in making this happen. We had a really fun conversation with Roger about all this, in terms of how to build an … more familiar with the, sort of, chemical analytics and identification side of that problem. And I see all sorts of …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … to my submission, they were saying that natural product identification– biosynthetic gene cluster identification was … especially across species that might be a little bit more genetically distant where the BGCs may have drifted but they …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … certainly the goal. I think with any kind of gene cluster identification, doing it with sequence alone you have to …
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Mateus Fiamenghi
… Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s …
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You Can Move, But You Can’t Hide
… the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science … to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … The U.S. Department of Energy Joint Genome Institute …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … to track infection. The parallel development of the SODmap Mobile app enabled SOD Blitz participants to geotag …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working directly with specific universities, continuing education programs in … Overall, our aim is to inspire students and established professionals to explore opportunities in STEM by providing …
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Industry Engagement Program
… the public sector: academic and government institutions — with capabilities that had remained largely unknown and … joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the JGI’s portfolio of user companies. Now the Department of Energy is uniting …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … software tool called geNomad that identifies and classifies mobile genetic elements based upon their gene content and …
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Exploring Polymorphisms Created by Transposable Elements
… (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … 8 of Natural Prodcast. This week, we have our conversation with Professor Eric Schmidt, from the University of Utah. … be related to each other, even though they had common elements. And so we really needed to get together. You know, …
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