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Natural Prodcast Episode 13: Francisco Barona Goméz
I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great … diversity” “ A Darwinian view of metabolism: molecular properties determine fitness” …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … then got funded to work for two years at the Max Planck for marine microbiology in Bremen, Germany. And I wanted to work … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … across agar, of course, has to do a lot with the different properties of the different molecules in the mixture. And so …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … to do some really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … the community so far. But being here and then being at the Marine Natural Products meeting in Ventura where I got to … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … working with him.  We talk about his father, the legendary marine natural products chemist, Richard Moore, and get into … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Isotope Probing (SIP) Used for the identification of active groups of organisms within a community. Individual samples … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … retain their activity and have different pharmacological properties. So they’re new compositions of matter. So one of … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, …
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Synthesis
… cycling and bioproduct applications.  The team has three subgroups: Synthetic Biology Lab : a user science group … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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