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The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based … emphasis that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … aims to encourage innovative research exploiting a diversity of capabilities. Previously, researchers had to … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … And I really dove into microbial physiology and microbial genetics, and really away from chemistry and synthesizing … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … are at the core of many environmental processes, and the genetic makeup of microbial species and communities forms …

The JGI Project Management Office carries out a number of activities to facilitate … Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … is usually going to be through synthetic biology or genetic engineering. But I think from what I’ve read you’ve … to do some really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s …

… my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for a couple … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and thematic scope of …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … publicly, (3) at the end of the embargo period. If data or analyses of the data are made publicly available in any …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … especially across species that might be a little bit more genetically distant where the BGCs may have drifted but they … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …