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… DAN: Hey, everybody. Welcome back for another episode of … colleagues. Aaron is doing some cool stuff with cool bacteria that I’m fascinated to learn more about. He works … Episode Transcript … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …

… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … to do some really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s …

… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which … The Secondary Metabolites Program offers users extensive genomics, biodesign and metabolomics capabilities to …

… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries …

… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … on synthetic biology of engineering gene expression in bacteria – however, the professor was actually quite … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more progress faster, … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and hopefully we can … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …

… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … for their substrates, that you couldn’t buy– there wasn’t a encyclopedia of enzymes at Aldridge that I could use to buy … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …