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UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

Below is a brief description of the process needed to prepare and ship samples for … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary …

The mission of the Joint Genome Institute is to serve the scientific community as a … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …

… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …