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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … E.M. & Dubilier, N. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 443, 950-5 … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …
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Natural Prodcast Episode 14: Nigel Mouncey
… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five … has led a vision for the JGI that sees secondary metabolism analysis and research as a driver for novel technologies …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … … The Mycocosm portal supports the annotation, comparative analysis, and distribution of fungal genome datasets. It …
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Community Science Program
Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science … … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic … communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences …
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Frequently Asked Questions: Project Management
… listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … metadata about the samples, and the sample QC results. … Analysis and annotation of publicly available projects can … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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CSP Large Scale Call
… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …
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