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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted at any … and requesting an optional letter of feasibility to accompany their proposal  should fill out this form . Please …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of … and Operations teams to enable the JGI’s focus on expanding molecular capabilities and functional genomics, …   Overview of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. This …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve … function.   To jointly support these missions, and to expand upon highly successful past collaborations, the DOE … The researcher then submits a proposal for consideration in the next …
Learn more
JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to …
Learn more
Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … But where taxol comes from is, from the bark of the yew tree, is where it was originally discovered. And so that … Episode Transcript … This is the first episode of Natural Prodcast, a podcast produced by the US Department of …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … they were expecting to. So you might know of like three or four or five molecules that you maybe had found and ground …
Learn more
Natural Prodcast Episode 17: Cassandra Quave
… food and health and botanical medicine. I’m also a mom of four kids now so ranging from 8 to 17 in age, so my home … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … a question about the complexity of the problem so and the scale. So thinking about 33,000 plants, how many plants …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … see how the biosynthetic gene cluster starts to merge and expand and accept new genes coming in and out. So, if you …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Natural Prodcast Episode 6: Marc Chevrette
… the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … in those two fields and the ability to process samples at scale. So, lots of samples. ALISON: Yeah, how many samples … really what my research focus has been. Maybe the last four or five years or so, this involves, you know, how …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with … Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI capabilities, … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Natural Prodcast Episode 5: Brad Moore
… And was at the university for over 40 years. There were four of us as kids in the family. I was number three. And … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . … use our science to connect to problems that are on global scales. So I think that’s one area of science that we’re …
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