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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … why we had the idea that the microviridins also could be completely different compounds. But that got at the idea …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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JGI Portals
… scientific community and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … novelties and expansions.  … The SMC provides complete sequence and annotation data for secondary …
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Natural Prodcast Episode 14: Nigel Mouncey
… 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get … that’s your turf.  NIGEL MOUNCEY: Yeah, great.  DAN: And completely free, right?  NIGEL MOUNCEY: It is completely … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Mission
Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional expertise to support the global research community in studies of … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …
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New Lineages of Life Group
… data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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IMG Group
… annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … nearly 18% of all existing species. Additionally, the complete linkage clustering made it possible to confidently …
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Secondary Metabolites Program
… for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … signatures of horizontal gene transfer. … The SMC provides complete sequence and annotation data for secondary …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … If we are only interested in that final product, which is completely potent and specific to the target we’re thinking … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Erratum to: Complete genome sequence of Atopobium parvulum type strain (IPP 1246T)
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science … through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …
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