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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been …
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Elucidating Bacterial Gene Functions in the Plant Microbiome
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … see as the overall “theme” of your research? I know you’ve generally worked in various marine organisms. Except during … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. … conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… BARONA-GOMEZ: Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a … it’s been selected for. So if you think about the possible functions that each one metabolite could have, then you … the active site of an enzyme. So there is no promiscuity, generally speaking, in primary metabolism. Nevertheless, …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … in a microalgae. There were four genes there. Not like a bacterial gene cluster, but they were still clustered in the …
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Natural Prodcast Episode 12: Nadine Ziemert
… of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all that stuff. And that’s the most laborious …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a … percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for a couple … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion and … After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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