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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very … and our collaborations to sequence that collection, mine genomes, and develop new technology to access natural …

… Below is a brief description of the process needed to prepare and ship samples for … steps outlined below. Click the drop-downs to learn more about each step in the process. If you have any questions, … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …

… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … computer analysis coupled with liquid chromatography mass spectrometry. We offer accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … and Appendix. An Appendix identifies the type of work or specific proposal to be covered under the Agreement. The … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… The mission of the Joint Genome Institute is to serve the scientific … missions, and to expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …

… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to …

… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …

… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate …

… global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of …