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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Science User Facility located at Lawrence Berkeley National Laboratory. Being a User Facility means that scientists from … This is the first episode of Natural Prodcast, a podcast produced by the US Department …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all that stuff. And that’s the most laborious work. But also, it’s the work where you learn the …

… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … I think the biggest difference is we’re all about collaboration here. We’re all about open science. And this is … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … the JGI product catalog. As a result certain products have been  discontinued , including smRNA, bisulfite sequencing, …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … fascinating. It really is fascinating. You know, us, in the laboratory, humans, we started by isolating this fungus by … This is episode 4 of Natural Prodcast, our interview with Dr Nancy Keller from …

… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … is FICUS, which stands for “ Facilities Integrating Collaborations for User Science .” This is kind of like a CSP, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

… The Joint Genome Institute and the Molecular Foundry have launched … proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. …

… Research in the Woyke laboratory focuses on the utility of … material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …

… The JGI Project Management Office carries out a number of activities to facilitate … to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … this. Marnix Medema: Yeah, absolutely. This is still a collaboration, indeed, with my group. And Tilmann Weber ’s … Marnix and his collaborators have a fantastic set of software tools for exploring secondary metabolite …

… Uncovering associations between plant roots and fungi that can help … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Their findings were described in …

… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … I talk about SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …