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Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an …  Through this identification, metabolomics enables functional genome annotation, improves understanding of the … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of …

… workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI …

… support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, …

… like a lot of people hedge their way into natural products by starting out in synthesis and then discovering more-- … oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are Tet repressors that … this is a really great question. I think that there is diffusion through the soil-- DAN: Sure. BETSY PARKINSON: --but …

… the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying … and protein folding models, to improve the accuracy of functional predictions and speed up genome analysis. … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… genetic differences and then expanded on on that knowledge by doing a second postdoc with Yi Tang at UCLA and then kind … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … where these strains coming from. Can you make any kind of association with the potential like, what’s the ecological …

… it’s really about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based … to society really does give you the chance to build those networks of folks that you may not normally run into or … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better …

… accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

… bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, … on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, … strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy …

The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a … the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We …

Project design with Principal Investigator Providing a general orientation to JGI systems to Investigators … your Project Manager will facilitate project execution by: Metadata verification and coordination with IMG , GOLD … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …