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… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical … The ranked proposal list, along with a recommendation from management at JGI and the other participating …

… we get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is … . So this is an algorithm that identifies, using machine learning models, that very tiny precursor peptide, encoding … all based on antiSMASH results. And so if you want to do deeper analysis on things, then you’re staying in the “BiG” …

… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … T ., Klenk H. P., Kyrpides N. C. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial …

This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This … data, another area I see a great potential will be machine learning and artificial intelligence. I would view that will … natural products or biosynthetic chemistry and want to dive deep on the topic, or just want to take a look at several …

… by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … work done by the JGI. More information is available in our Publications Policy on our Data Policy & Support page.  … …

… evolution. It also utilizes advanced tools, including deep learning algorithms for gene annotation and protein folding … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … for Ray Andersen there, and had a very enjoyable time learning about natural products science. DAN:  Yeah, great. …

… prefers to be known among friends in natural products. He’s from Langebio in Irapuato, Mexico, and an incredibly bright … BARONA-GOMEZ: Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct … platform enables users to validate hypotheses generated from mining genomic data by designing and assembling …

… and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … plasmid genome resource featuring the largest collection of plasmids automatically identified from genomes, metagenomes, …

… secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …