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… As a National User Facility, the JGI serves more than 2,500 … and state-of-the-art sample processing.  Our Biodesign platform enables users to test hypotheses via designed and assembled … Our User Programs entail a competitive, proposal-based process including peer …

… The Facilities Integrating Collaborations for User Science … that truly integrated the capabilities of more than one facility. The FICUS initiative not only simplifies and streamlines this process, but enables scientists to conduct fundamental science … provides customized analysis, the JGI also participates in publication of results. …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics … Metabolite annotation based on chemical standards or computational approaches. Relative abundance of identified …

… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic …

… DAN: You’re listening to the US Department of Energy Joint … lot of like synthetic chemistry effort to create a bunch of novel compounds that actually didn’t pan out. DAN: And there … DNA sequence – sequences for the genes that code for the proteins that produce secondary metabolites. Do you …

… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … like massive brownouts in California when you’re doing the computational analysis of metagenomes. DAN UDWARY: Well, the …

… do engineering to improve the physical properties of a protein and make it easier to work with. But sometimes, what … So– yeah, with our collaboration with JGI , we basically designed a library that includes hundreds of different … from having a much more complicated ligand to wrestle with computationally and pyramidalization is that we need good …

… DAN: Hello, everyone, and Welcome back for Episode 14 of … we’re doing. And using these together along with all of our computational tools to really build out much more of an … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… The Synthetic Biology lab is divided into a DNA synthesis production group and a … our efforts on integrating database mining and sequence design with scaling the production of large, difficult to … applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic driven …

… DAN UDWARY: Hey everyone and welcome back to a new session of … or you could look at metabolism markers like phosphoprotein S6. So if there is a perturbagen present– DAN … in order to put them together to build pathways, to make novel compounds, or to find analogs. And that was Warp …

… could say the gut is, kind of. But not the same way this is designed specifically to house symbiotic bacteria. And so … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … easy to search for because there are patterns of domains, protein domains that you look for. And if you find those all …

… DAN: Welcome back for episode 9 of Natural Prodcast. This … of sort of cooperative and collaborative science. It was designed to ensure equitable benefit sharing if any … anyway, to anywhere tackle that. So you’ve got to do it computationally. Right? So where do we start with that? …