Search

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … were new genera, these basic taxonomic group called the genus. We found there were new genera in the ocean that no … pellets. So, we’re about ready to send those for genomic analysis. And of course, we don’t know anything about the …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The …

… And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … tool. It’s the best thing that we have. And its rule-based analysis is second to none. And it’s the most valuable thing … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything …

… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … their potential applications in the bioeconomy including biofuels, biochemicals and sustainable agriculture. …

… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … against. So, one of those is Acinetibacter . This is a genus of bacteria that’s really popped up at funding … tasked with looking at, you know, hundreds of thousands of Streptomyces and actinomycete genomes, and trying to find …

… The mission of the Joint Genome Institute is to serve the scientific … relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center … Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) …

… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to …

… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … It’s just that they’re less studied than streptomyces, the genus, right? Dan Udwary: Right. Kate Duncan: And … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … sensing within a single species. DAN: Within a species. Genus? BETSY PARKINSON: So we don't know yet. DAN: Yeah, OK. … unknown. And so we've done the sequence similallity network analysis where we look for other receptors with sequence …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … actinomycete bacterium called Salinospora . This new genus was discovered by friends and colleagues at the … Pacific Ocean, or in the bay, and be able to do chemical analysis, as well as transcript analysis. And what we’re …

… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the … accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the user. …