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Natural Prodcast Episode 24: Jackie Winter and SMC
… has got to be new, or at least we hope. This is what we’re using to get funding, but. DAN UDWARY: Well, you’ve seen … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … hopefully, the system that we have built will continue to scale. So far it’s– so far, so good. But we’ll add more …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Plant Program
… the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … produces high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. It is now available for both …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint … The other way – the RiPP way, is to make a protein using the normal cellular way of making proteins, with a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 18: A CSP Primer
… a new investigator who wants to try out something smaller scale, or if you’re just curious to know more, then I really … There’s a lot of manual work in terms of the annotate, the assembly, the curation, QC, annotation of these data sets. … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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How To Use Our Systems
… … Information on Software Looking for information on our software, including BBTools ? Click …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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User Support
The JGI Project Management Office carries out a number of activities to … project at any time by logging on to the Genome Portals using your JGI login. After sequencing/metabolomics has … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 17: Cassandra Quave
It’s awesome. CASSANDRA QUAVE: Yeah, and I’m sorry if I’m using like acronyms to NSF, National Science Foundation, … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … a question about the complexity of the problem so and the scale. So thinking about 33,000 plants, how many plants …
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Frequently Asked Questions: Proposal Submission
Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at … limits, and instructions.  Many of the submissions are done using web-based forms.   To view the proposal templates, go … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … very first compound was introduced in the early 90s and by using a polymer as a delivery mechanism. So, the polymer … the enediyne we have isolated to date by the traditional methods. But more importantly, we hope through enediyne that …
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Natural Prodcast Episode 5: Brad Moore
… think that was the first perhaps the only case of a genome assembly being aided by a chemical entity. Dan: Yeah, we … you use that to do? Brad: Yeah, absolutely. You know, we’re using it as a way to be able to better predict when a toxic … use our science to connect to problems that are on global scales. So I think that’s one area of science that we’re …
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